STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DENND1BDENN domain containing 1B. (766 aa)    
Predicted Functional Partners:
RAB35
RAB35, member RAS oncogene family.
    
 0.979
IFT27
Intraflagellar transport 27.
    
 0.806
YWHAE
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon.
    
  0.724
DENND1A
DENN domain containing 1A.
     
0.711
LOC101877003
RAB28, member RAS oncogene family.
     
 0.633
GDI2
GDP dissociation inhibitor 2.
     
 0.619
LOC101869600
CHM Rab escort protein.
   
 
  0.617
ITSN2
Intersectin 2.
    
 
 0.562
RAB21
RAB21, member RAS oncogene family.
      
 0.527
YWHAZ
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta.
    
  0.509
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
Server load: low (26%) [HD]