STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTBD19BTB domain containing 19. (301 aa)    
Predicted Functional Partners:
UBXN7
UBX domain protein 7.
    
   0.944
MRPL27
Mitochondrial ribosomal protein L27.
   
 
 0.829
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.825
LOC101881481
Mitochondrial ribosomal protein L23.
   
 
 0.824
ENSMUNP00000007534
annotation not available
   
 
 0.823
MRPL47
Mitochondrial ribosomal protein L47.
   
 
 0.820
MRPL43
Mitochondrial ribosomal protein L43.
   
   0.815
MRPL19
Mitochondrial ribosomal protein L19.
   
 
 0.813
LOC101871021
Mitochondrial ribosomal protein L30.
   
 
 0.810
MRPL40
Mitochondrial ribosomal protein L40.
   
 
 0.803
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.