STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101871901histidyl-tRNA synthetase 1. (365 aa)    
Predicted Functional Partners:
EIF2S1
Eukaryotic translation initiation factor 2 subunit alpha.
   
 0.909
DARS2
aspartyl-tRNA synthetase 2, mitochondrial.
  
  
 0.834
YARS1
tyrosyl-tRNA synthetase 1.
  
 
 0.821
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.778
EIF2AK4
Eukaryotic translation initiation factor 2 alpha kinase 4.
     
0.774
KARS1
lysyl-tRNA synthetase 1.
  
 
 0.695
RPTOR
Regulatory associated protein of MTOR complex 1.
    
 0.678
GCN1
GCN1 activator of EIF2AK4.
   
 
 0.673
LOC101873588
Eukaryotic translation initiation factor 2 subunit gamma.
   
 0.668
EEFSEC
Eukaryotic elongation factor, selenocysteine-tRNA specific.
   
 0.641
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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