STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBAC1UBA domain containing 1. (388 aa)    
Predicted Functional Partners:
RNF123
Ring finger protein 123.
   
 
 0.919
CAMSAP1
Calmodulin regulated spectrin associated protein 1.
 
    
 0.756
UBL7
Ubiquitin like 7.
    
 0.670
LOC101874167
Ribosomal protein S27a.
    
 0.668
ZFAND4
Zinc finger AN1-type containing 4.
    
 0.627
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
      
 0.592
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
     
 0.547
IMPG2
Interphotoreceptor matrix proteoglycan 2.
      
 0.522
ENSMUNP00000001811
annotation not available
    
 0.511
UBQLN4
Ubiquilin 4.
    
 0.511
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.