STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMUNP00000013347annotation not available (126 aa)    
Predicted Functional Partners:
RBM48
RNA binding motif protein 48.
    
 
 0.965
SF3B4
Splicing factor 3b subunit 4.
    
   0.921
LOC101874780
U5 small nuclear ribonucleoprotein 200 kDa helicase.
    
   0.921
SNRPB
Small nuclear ribonucleoprotein polypeptides B and B1.
    
   0.921
CWC15
CWC15 spliceosome associated protein homolog.
    
   0.921
LOC101869134
Ring finger protein 113A.
    
   0.921
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
    
   0.921
PRPF8
pre-mRNA processing factor 8.
    
   0.921
SNRPG
Small nuclear ribonucleoprotein polypeptide G.
    
   0.921
CWC22
CWC22 spliceosome associated protein homolog.
    
   0.921
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.