STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXO16F-box protein 16. (179 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase associated protein 1.
    
 0.983
NUDT12
Nudix hydrolase 12.
    
  0.783
CDC6
Cell division cycle 6.
    
 0.766
LOC101881572
Mitochondrial ribosomal protein L2.
    
 0.765
RNF7
Ring finger protein 7.
    
 0.758
RBX1
Ring-box 1.
    
 0.758
CUL1
Cullin 1.
    
 0.754
FBXO2
F-box protein 2.
    
 0.745
CACUL1
CDK2 associated cullin domain 1.
    
 0.735
CUL3
Cullin 3.
    
 0.735
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.