STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101880213BLOC-1 related complex subunit 7. (106 aa)    
Predicted Functional Partners:
SNAPIN
SNAP associated protein.
   
 
 0.763
BORCS6
BLOC-1 related complex subunit 6.
    
 
 0.759
BORCS5
BLOC-1 related complex subunit 5.
    
 
 0.758
BLOC1S2
Biogenesis of lysosomal organelles complex 1 subunit 2.
    
 
 0.756
LOC101873379
BLOC-1 related complex subunit 8.
    
 
 0.674
KXD1
KxDL motif containing 1.
    
 
 0.635
CREBL2
cAMP responsive element binding protein like 2.
    
 
 0.555
LAMTOR3
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3.
    
   0.408
CHMP5
Charged multivesicular body protein 5.
      
 0.406
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.