STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HECTD1HECT domain E3 ubiquitin protein ligase 1. (2572 aa)    
Predicted Functional Partners:
TRIP12
Thyroid hormone receptor interactor 12.
   
  
0.876
UBR3
Ubiquitin protein ligase E3 component n-recognin 3.
   
  
 0.734
UBA3
Ubiquitin like modifier activating enzyme 3.
     
 0.656
BIRC6
Baculoviral IAP repeat containing 6.
   
 
 0.596
ZRANB1
Zinc finger RANBP2-type containing 1.
    
 
 0.560
UBR4
Ubiquitin protein ligase E3 component n-recognin 4.
   
  
 0.532
UBR2
Ubiquitin protein ligase E3 component n-recognin 2.
   
  
 0.506
APC2
APC regulator of WNT signaling pathway 2.
  
 
 0.489
LOC101870175
Ubiquitin specific peptidase 9 X-linked.
   
   0.476
ATG7
Autophagy related 7.
     
 0.449
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.