STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XRN15'-3' exoribonuclease 1. (1623 aa)    
Predicted Functional Partners:
DCP1B
Decapping mRNA 1B.
    
 0.977
PATL2
PAT1 homolog 2.
    
 0.960
DCP1A
Decapping mRNA 1A.
    
 0.960
LSM3
LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated.
    
 0.959
DCP2
Decapping mRNA 2.
   
 0.957
XRN2
5'-3' exoribonuclease 2.
  
 
0.954
ENSMUNP00000014488
annotation not available
 
     0.931
DKC1
Dyskerin pseudouridine synthase 1.
    
 
 0.924
ZFP36L1
ZFP36 ring finger protein like 1.
    
 0.892
ENSMUNP00000009761
annotation not available
   
 
 0.878
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.