STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1orf116Chromosome unknown open reading frame, human C1orf116. (482 aa)    
Predicted Functional Partners:
LOC101873986
Homer scaffold protein 3.
    
   0.627
NKX3-1
NK3 homeobox 1.
      
 0.519
IBSP
Integrin binding sialoprotein.
  
     0.444
INIP
INTS3 and NABP interacting protein.
      
 0.440
ENSMUNP00000004014
annotation not available
  
     0.418
LOC101877924
BPI fold-containing family B member 4-like.
  
     0.407
RADIL
Rap associating with DIL domain.
  
     0.401
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.