STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAZ1ABromodomain adjacent to zinc finger domain 1A. (1566 aa)    
Predicted Functional Partners:
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
    
 0.982
SMARCA1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1.
    
 0.982
LOC101877093
DNA polymerase epsilon 3, accessory subunit.
    
 
 0.975
CHRAC1
Chromatin accessibility complex subunit 1.
   
 
 0.901
HELLS
Helicase, lymphoid specific.
    
 0.876
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
    
 0.773
SF3B1
Splicing factor 3b subunit 1.
   
 0.716
ENSMUNP00000018917
annotation not available
    
 0.713
ENSMUNP00000018926
annotation not available
    
 0.713
ENSMUNP00000018930
annotation not available
    
 0.713
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.