STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEGR1Neuronal growth regulator 1. (366 aa)    
Predicted Functional Partners:
ENSMUNP00000012437
annotation not available
    
 0.642
LOC101870373
Protein tyrosine kinase 7 (inactive).
    
0.642
HABP2
Hyaluronan binding protein 2.
    
 0.612
HGFAC
HGF activator.
    
 0.612
LINGO2
Leucine rich repeat and Ig domain containing 2.
    
 0.593
LINGO1
Leucine rich repeat and Ig domain containing 1.
    
 0.577
MRE11
MRE11 homolog, double strand break repair nuclease.
    
 0.550
ENSMUNP00000016583
annotation not available
    
 0.542
CRKL
CRK like proto-oncogene, adaptor protein.
     
 0.535
CDH11
Cadherin 11.
    
 0.535
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.