STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCARF2Scavenger receptor class F member 2. (797 aa)    
Predicted Functional Partners:
LOC101869833
TNF receptor superfamily member 13C.
    
 0.614
LOC101877199
Interleukin-1 receptor antagonist protein-like.
    
 0.588
C6
Complement C6.
   
  0.575
ENSMUNP00000010720
annotation not available
    
 0.573
C8B
Complement C8 beta chain.
   
  0.559
LOC101875127
CD59 molecule (CD59 blood group).
    
 0.518
ENSMUNP00000016923
annotation not available
    
  0.506
LOC101879371
Interleukin-1 receptor type 1-like.
    
  0.506
LOC101868714
Interleukin-1 receptor type 1-like.
    
  0.506
ENSMUNP00000007885
annotation not available
   
 0.496
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.