STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB8BRAB8B, member RAS oncogene family. (187 aa)    
Predicted Functional Partners:
GDI2
GDP dissociation inhibitor 2.
   
 0.926
RAB1A
RAB1A, member RAS oncogene family.
  
 
0.900
MICALL2
MICAL like 2.
    
 0.887
LOC101874563
RAB3A interacting protein.
    
 0.877
RAB3IL1
RAB3A interacting protein like 1.
    
 0.861
EXOC4
Exocyst complex component 4.
    
 0.853
EXOC2
Exocyst complex component 2.
    
 0.844
RAB8A
RAB8A, member RAS oncogene family.
  
  
 
0.834
RILPL2
Rab interacting lysosomal protein like 2.
    
 
 0.828
EXOC5
Exocyst complex component 5.
 
 
 0.822
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.