STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGMATAgmatinase. (439 aa)    
Predicted Functional Partners:
OAT
Ornithine aminotransferase.
  
 0.965
HAL
Histidine ammonia-lyase.
  
 
 0.942
SRM
Spermidine synthase.
  
 
 0.939
OTC
Ornithine carbamoyltransferase.
   
 0.938
ODC1
Ornithine decarboxylase 1.
  
 
 0.931
CRYM
Crystallin mu.
  
 
 0.925
SMS
Spermine synthase.
  
 
 0.916
LOC101867905
Proline dehydrogenase 1, mitochondrial-like.
  
 
 0.910
AZIN1
Antizyme inhibitor 1.
  
 
 0.905
ASS1
Argininosuccinate synthase 1.
   
 
 0.903
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.