STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101870229Usherin. (1449 aa)    
Predicted Functional Partners:
LAMB3
Laminin subunit beta 3.
  
0.824
LAMB1
Laminin subunit beta 1.
   
0.811
LAMC3
Laminin subunit gamma 3.
   
0.808
LAMC2
Laminin subunit gamma 2.
   
0.808
LAMC1
Laminin subunit gamma 1.
   
0.808
ENSMUNP00000004349
annotation not available
    
0.668
WHRN
Whirlin.
    
 
 0.664
PDZD7
PDZ domain containing 7.
    
 
 0.661
USH1C
USH1 protein network component harmonin.
    
 
 0.660
MYO6
Myosin VI.
    
 
 0.649
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.