STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DGCR8DGCR8 microprocessor complex subunit. (775 aa)    
Predicted Functional Partners:
DROSHA
Drosha ribonuclease III.
   
 0.994
DICER1
Dicer 1, ribonuclease III.
   
 0.946
MRPL44
Mitochondrial ribosomal protein L44.
   
 0.921
DDX17
DEAD-box helicase 17.
    
 
 0.727
DDX5
DEAD-box helicase 5.
    
 
 0.705
XPO5
Exportin 5.
   
  
 0.628
METTL14
Methyltransferase like 14.
   
  
 0.608
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
    
 
 0.592
RANBP1
RAN binding protein 1.
 
    
 0.533
AGO2
Argonaute RISC catalytic component 2.
      
 0.530
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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