STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPIL2Peptidylprolyl isomerase like 2. (521 aa)    
Predicted Functional Partners:
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.981
CDC40
Cell division cycle 40.
   
 0.970
SRRM1
Serine and arginine repetitive matrix 1.
    
 0.966
SYF2
SYF2 pre-mRNA splicing factor.
 
  
 0.963
MTREX
Mtr4 exosome RNA helicase.
   
 0.957
CCDC12
Coiled-coil domain containing 12.
   
 0.954
PPWD1
Peptidylprolyl isomerase domain and WD repeat containing 1.
  
0.950
LOC101878334
Peptidylprolyl isomerase like 3.
  
  
 
0.941
CWC27
CWC27 spliceosome associated cyclophilin.
  
0.931
PRPF8
pre-mRNA processing factor 8.
   
 0.930
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.