STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX51DEAD-box helicase 51. (563 aa)    
Predicted Functional Partners:
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.893
WDR12
WD repeat domain 12.
   
 0.834
SF3B1
Splicing factor 3b subunit 1.
   
 0.832
EBNA1BP2
EBNA1 binding protein 2.
   
 0.829
GNL3
G protein nucleolar 3.
  
 0.820
BOP1
BOP1 ribosomal biogenesis factor.
   
 0.811
PRPF6
pre-mRNA processing factor 6.
    
 0.781
MTREX
Mtr4 exosome RNA helicase.
   
 0.776
NOP58
NOP58 ribonucleoprotein.
  
 
 0.773
RBM8A
RNA binding motif protein 8A.
    
 0.768
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.