STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTREXMtr4 exosome RNA helicase. (1030 aa)    
Predicted Functional Partners:
EXOSC9
Exosome component 9.
   
 0.999
EXOSC10
Exosome component 10.
   
 0.999
EXOSC2
Exosome component 2.
   
 0.998
EXOSC4
Exosome component 4.
   
 0.996
EXOSC7
Exosome component 7.
   
 0.996
WDR3
WD repeat domain 3.
   
 0.996
EXOSC3
Exosome component 3.
   
 0.995
PDCD11
Programmed cell death 11.
   
 0.995
EXOSC8
Exosome component 8.
   
 0.995
C1D
C1D nuclear receptor corepressor.
   
 0.994
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.