STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGEF16Rho guanine nucleotide exchange factor 16. (715 aa)    
Predicted Functional Partners:
EPHA1
EPH receptor A1.
    
 0.744
CDC42
Cell division cycle 42.
    
 0.715
EPHA8
EPH receptor A8.
    
 0.693
ECT2
Epithelial cell transforming 2.
     
0.627
AKAP13
A-kinase anchoring protein 13.
    
0.613
RHOG
Ras homolog family member G.
    
 0.597
ALS2
Alsin Rho guanine nucleotide exchange factor ALS2.
    
 0.597
LOC101880197
Rho-related GTP-binding protein RhoG-like.
    
 0.597
ENSMUNP00000002546
annotation not available
     
 0.566
ENSMUNP00000002547
annotation not available
     
 0.566
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.