STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101874353MCTS1 re-initiation and release factor. (181 aa)    
Predicted Functional Partners:
DENR
Density regulated re-initiation and release factor.
   
 
 0.996
EIF1B
Eukaryotic translation initiation factor 1B.
   
 
 0.964
OLA1
Obg like ATPase 1.
 
 
  
 0.909
RPS28
Ribosomal protein S28.
    
   0.793
C9orf64
Chromosome unknown open reading frame, human C9orf64.
 
      0.780
RPS8
Ribosomal protein S8.
   
   0.776
LOC101872328
Ribosomal protein S3.
    
   0.769
RPS3A
Ribosomal protein S3A.
    
   0.769
IMP3
IMP U3 small nucleolar ribonucleoprotein 3.
   
 
 0.764
RPS11
Ribosomal protein S11.
   
   0.762
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.