STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGI2Leucine rich repeat LGI family member 2. (577 aa)    
Predicted Functional Partners:
ADAM23
ADAM metallopeptidase domain 23.
     
 0.849
ADAM22
ADAM metallopeptidase domain 22.
     
 0.845
ENSMUNP00000008330
annotation not available
    
 0.829
CECR2
Cat eye syndrome chromosome region, candidate 2.
    
 0.601
C1QC
Complement C1q C chain.
    
  0.557
FBXL17
F-box and leucine rich repeat protein 17.
   
 
 0.538
LOC101874167
Ribosomal protein S27a.
    
  0.501
NXPH3
Neurexophilin 3.
  
   
 0.497
TRRAP
Transformation/transcription domain associated protein.
    
  0.487
TAF12
TATA-box binding protein associated factor 12.
    
 0.487
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.