STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSRP1Nuclear speckle splicing regulatory protein 1. (569 aa)    
Predicted Functional Partners:
CDC5L
Cell division cycle 5 like.
   
   0.962
SRRM1
Serine and arginine repetitive matrix 1.
     
 0.843
PPIL4
Peptidylprolyl isomerase like 4.
    
 0.798
PPIL2
Peptidylprolyl isomerase like 2.
    
  0.796
CWC22
CWC22 spliceosome associated protein homolog.
   
 
  0.783
LOC101878334
Peptidylprolyl isomerase like 3.
    
  0.783
DHX40
DEAH-box helicase 40.
   
 0.752
PPIG
Peptidylprolyl isomerase G.
   
  0.742
YJU2
YJU2 splicing factor homolog.
   
 
  0.736
SLU7
SLU7 homolog, splicing factor.
   
 
 0.723
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.