STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPL5Ribosomal protein L5. (297 aa)    
Predicted Functional Partners:
RPL30
Ribosomal protein L30.
   
 0.999
RPL15
Ribosomal protein L15.
 
 
 0.999
LOC101874054
Ribosomal protein L7a.
  
 0.999
LOC101872328
Ribosomal protein S3.
  
 
 0.999
LOC101879485
Ribosomal protein L18a.
   
 0.999
RPL27
Ribosomal protein L27.
  
 0.999
RPS11
Ribosomal protein S11.
  
 
 0.999
RPL36
Ribosomal protein L36.
   
 0.999
WDR31
WD repeat domain 31.
   
 
 0.999
RPL13
Ribosomal protein L13.
   
 0.999
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.