STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR70WD repeat domain 70. (645 aa)    
Predicted Functional Partners:
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.958
CDC40
Cell division cycle 40.
   
  0.953
DHX38
DEAH-box helicase 38.
 
  
 0.940
PPWD1
Peptidylprolyl isomerase domain and WD repeat containing 1.
   
 0.905
YJU2
YJU2 splicing factor homolog.
    
  0.898
CWC25
CWC25 spliceosome associated protein homolog.
    
  0.898
SYF2
SYF2 pre-mRNA splicing factor.
    
  0.898
WDR25
WD repeat domain 25.
   
 
0.875
PRPF8
pre-mRNA processing factor 8.
    
 
 0.874
LOC101881443
DEAH-box helicase 8.
 
 
 0.848
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.