STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPHA4EPH receptor A4. (927 aa)    
Predicted Functional Partners:
EFNA5
Ephrin A5.
   
 0.916
EFNA2
Ephrin A2.
   
 0.912
EFNB2
Ephrin B2.
   
 0.892
ENSMUNP00000008330
annotation not available
    
 0.888
ENSMUNP00000012173
annotation not available
   
 0.876
EFNB1
Ephrin B1.
   
 0.873
ITSN2
Intersectin 2.
   
 0.817
NGEF
Neuronal guanine nucleotide exchange factor.
    
 0.744
ITSN1
Intersectin 1.
    
 0.697
IL13RA1
Interleukin 13 receptor subunit alpha 1.
    
 0.647
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.