STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APOLD1Apolipoprotein L domain containing 1. (246 aa)    
Predicted Functional Partners:
FANCM
FA complementation group M.
    
 0.984
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
   
 
 0.871
RPA1
Replication protein A1.
    
 0.769
RPA2
Replication protein A2.
   
 0.762
LIN52
Lin-52 DREAM MuvB core complex component.
    
 0.712
LIN9
Lin-9 DREAM MuvB core complex component.
    
 0.691
MEIOB
Meiosis specific with OB-fold.
    
 0.686
ERCC4
ERCC excision repair 4, endonuclease catalytic subunit.
    
  0.635
RBBP7
RB binding protein 7, chromatin remodeling factor.
    
 0.629
RBBP4
RB binding protein 4, chromatin remodeling factor.
    
 0.629
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.