STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SND1Staphylococcal nuclease and tudor domain containing 1. (849 aa)    
Predicted Functional Partners:
MTDH
Metadherin.
    
 
 0.976
ENSMUNP00000000653
annotation not available
   
 0.805
LOC101869929
Piwi like RNA-mediated gene silencing 1.
   
 0.805
IMPDH2
Inosine monophosphate dehydrogenase 2.
    
 0.772
SERBP1
SERPINE1 mRNA binding protein 1.
   
 
 0.736
LOC101878707
Tudor and KH domain containing.
   
0.710
FMR1
FMRP translational regulator 1.
    
 0.682
FXR1
FMR1 autosomal homolog 1.
    
 0.639
AGO2
Argonaute RISC catalytic component 2.
    
 
 0.625
SOD1
Superoxide dismutase 1.
 
      0.624
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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