STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP10Ubiquitin specific peptidase 10. (793 aa)    
Predicted Functional Partners:
G3BP1
G3BP stress granule assembly factor 1.
   
 
 0.969
G3BP2
G3BP stress granule assembly factor 2.
   
 
 0.969
TRNAU1AP
tRNA selenocysteine 1 associated protein 1.
    
 
 0.933
CFTR
CF transmembrane conductance regulator.
    
 0.877
USP13
Ubiquitin specific peptidase 13.
     
 0.808
SNX12
Sorting nexin 12.
    
 0.804
USP5
Ubiquitin specific peptidase 5.
     
 0.775
CAPRIN1
Cell cycle associated protein 1.
   
 
 0.754
TP63
Tumor protein p63.
    
 0.742
TP73
Tumor protein p73.
    
 0.742
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.