STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMC2C-X9-C motif containing 2. (83 aa)    
Predicted Functional Partners:
CMC4
C-X9-C motif containing 4.
     
 0.626
LOC101876045
Cytochrome c oxidase copper chaperone.
   
 
 0.591
COA6
Cytochrome c oxidase assembly factor 6 homolog.
     
 0.586
ENSMUNP00000007873
annotation not available
   
 
 0.579
COX19
Cytochrome c oxidase assembly protein COX19.
     
 0.564
PUM1
Pumilio RNA binding family member 1.
    
   0.557
PUM2
Pumilio RNA binding family member 2.
    
   0.557
AASDH
Aminoadipate-semialdehyde dehydrogenase.
      
 0.551
LOC101872770
Protein C receptor.
      
 0.528
NEK4
NIMA related kinase 4.
      
 0.527
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.