STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUDT21Nudix hydrolase 21. (227 aa)    
Predicted Functional Partners:
CPSF6
Cleavage and polyadenylation specific factor 6.
   
 0.999
YTHDC2
YTH domain containing 2.
   
 0.972
ENSMUNP00000004198
annotation not available
    
 0.954
ZC3H6
Zinc finger CCCH-type containing 6.
    
 0.954
CPSF4
Cleavage and polyadenylation specific factor 4.
    
 0.954
LOC101878560
pre-mRNA 3'-end-processing factor FIP1-like.
   
 0.952
ENSMUNP00000008226
annotation not available
   
 0.952
YTHDC1
YTH domain containing 1.
    
 
 0.951
SRSF3
Serine and arginine rich splicing factor 3.
   
 
 0.905
CSTF2
Cleavage stimulation factor subunit 2.
   
 0.901
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.