STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMS22LMMS22 like, DNA repair protein. (1247 aa)    
Predicted Functional Partners:
ASF1A
Anti-silencing function 1A histone chaperone.
   
 
 0.730
BRCA1
BRCA1 DNA repair associated.
   
 
 0.557
MCM2
Minichromosome maintenance complex component 2.
   
 
 0.557
GJA10
Gap junction protein alpha 10.
      
 0.528
ENSMUNP00000019563
annotation not available
      
 0.526
HIVEP3
HIVEP zinc finger 3.
      
 0.524
STXBP6
Syntaxin binding protein 6.
      
 0.522
BARD1
BRCA1 associated RING domain 1.
   
 
 0.519
POLE2
DNA polymerase epsilon 2, accessory subunit.
   
    0.487
LOC101874837
Myotubularin-related protein 13.
      
 0.485
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.