STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCLRE1CDNA cross-link repair 1C. (685 aa)    
Predicted Functional Partners:
PRKDC
Protein kinase, DNA-activated, catalytic subunit.
    
 0.990
XRCC5
X-ray repair cross complementing 5.
    
 0.982
XRCC6
X-ray repair cross complementing 6.
   
 0.972
ENSMUNP00000004883
annotation not available
   
 0.922
INTS4
Integrator complex subunit 4.
   
 0.881
CSTF1
Cleavage stimulation factor subunit 1.
   
 0.852
CSTF3
Cleavage stimulation factor subunit 3.
  
 0.851
WDR82
WD repeat domain 82.
    
 0.851
FANCM
FA complementation group M.
  
 0.849
INTS1
Integrator complex subunit 1.
    
 0.845
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.