STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYF6Myogenic factor 6. (243 aa)    
Predicted Functional Partners:
ENSMUNP00000001886
annotation not available
    
 0.814
TCF3
Transcription factor 3.
    
 0.814
TCF12
Transcription factor 12.
    
 0.814
MEF2D
Myocyte enhancer factor 2D.
    
 0.784
MEF2B
Myocyte enhancer factor 2B.
    
 0.732
CACNG1
Calcium voltage-gated channel auxiliary subunit gamma 1.
   
  
 0.696
MYF5
Myogenic factor 5.
  
 
0.672
MEF2A
Myocyte enhancer factor 2A.
    
 0.668
MEF2C
Myocyte enhancer factor 2C.
    
 0.668
MYOD1
Myogenic differentiation 1.
   
 
0.660
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.