STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BOLLBoule homolog, RNA binding protein. (105 aa)    
Predicted Functional Partners:
LOC101878558
Serine and arginine rich splicing factor 2.
  
 
 0.754
UBA5
Ubiquitin like modifier activating enzyme 5.
    
   0.717
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.701
SNRPE
Small nuclear ribonucleoprotein polypeptide E.
   
 0.698
SNRPG
Small nuclear ribonucleoprotein polypeptide G.
   
 0.697
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.690
TIA1
TIA1 cytotoxic granule associated RNA binding protein.
  
 
 0.689
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.688
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
 0.687
LOC101879554
Serine and arginine rich splicing factor 1.
    
 0.669
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.