STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THUMPD1THUMP domain containing 1. (309 aa)    
Predicted Functional Partners:
NAT10
N-acetyltransferase 10.
   
 0.923
TRMT1L
tRNA methyltransferase 1 like.
    
 
 0.766
TRUB1
TruB pseudouridine synthase family member 1.
   
 
 0.747
FDXACB1
Ferredoxin-fold anticodon binding domain containing 1.
  
 
 0.731
DUS2
Dihydrouridine synthase 2.
  
 
 0.703
DKC1
Dyskerin pseudouridine synthase 1.
   
 
 0.628
PUS1
Pseudouridine synthase 1.
   
 
 0.594
TRUB2
TruB pseudouridine synthase family member 2.
   
 
 0.581
MAF1
MAF1 homolog, negative regulator of RNA polymerase III.
    
 
 0.575
PUS7
Pseudouridine synthase 7.
   
 
 0.547
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.