STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARID5AAT-rich interaction domain 5A. (516 aa)    
Predicted Functional Partners:
SAP30L
SAP30 like.
    
 0.721
SAP30
Sin3A associated protein 30.
    
 0.721
PBRM1
Polybromo 1.
   
 
 0.689
BRMS1L
BRMS1 like transcriptional repressor.
    
 0.687
SUDS3
SDS3 homolog, SIN3A corepressor complex component.
    
 0.687
SMARCB1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
    
 
 0.682
ACTL6A
Actin like 6A.
    
 
 0.669
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 
 0.661
SMARCC1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1.
   
 
 0.622
SAP18
Sin3A associated protein 18.
     
 0.614
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.