STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WBP4WW domain binding protein 4. (391 aa)    
Predicted Functional Partners:
SNRPB
Small nuclear ribonucleoprotein polypeptides B and B1.
    
 
 0.959
LOC101874780
U5 small nuclear ribonucleoprotein 200 kDa helicase.
    
 
 0.955
PPIH
Peptidylprolyl isomerase H.
    
 0.947
LSM6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.
    
 0.947
ZMAT2
Zinc finger matrin-type 2.
   
 0.933
PRPF4
pre-mRNA processing factor 4.
    
  0.929
MFAP1
Microfibril associated protein 1.
   
 0.929
PRPF38A
pre-mRNA processing factor 38A.
   
 0.928
PRPF6
pre-mRNA processing factor 6.
    
 0.926
SMU1
SMU1 DNA replication regulator and spliceosomal factor.
    
 0.905
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.