STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REEP1Receptor accessory protein 1. (260 aa)    
Predicted Functional Partners:
REEP2
Receptor accessory protein 2.
  
 
 
0.680
ZFYVE27
Zinc finger FYVE-type containing 27.
    
 
 0.608
REEP3
Receptor accessory protein 3.
  
 
 
0.570
WASHC5
WASH complex subunit 5.
      
 0.526
NIPA1
NIPA magnesium transporter 1.
      
 0.525
SPG11
SPG11 vesicle trafficking associated, spatacsin.
      
 0.519
ATL2
Atlastin GTPase 2.
    
 
 0.476
ATL1
Atlastin GTPase 1.
    
 
 0.476
RAB3GAP2
RAB3 GTPase activating non-catalytic protein subunit 2.
    
 
 0.465
SPAST
Spastin.
   
 
 0.458
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.