STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAF15TATA-box binding protein associated factor 15. (482 aa)    
Predicted Functional Partners:
TARDBP
TAR DNA binding protein.
   
 0.875
SRSF10
Serine and arginine rich splicing factor 10.
   
 0.832
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 0.828
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.826
TNPO1
Transportin 1.
   
 
 0.814
TAF12
TATA-box binding protein associated factor 12.
   
  0.809
TAF13
TATA-box binding protein associated factor 13.
   
 0.785
LOC101875309
TATA-box binding protein associated factor 11.
    
  0.782
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.777
TAF4B
TATA-box binding protein associated factor 4b.
   
  0.774
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.