STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLSTN1Calsyntenin 1. (980 aa)    
Predicted Functional Partners:
LOC101870775
Kinesin light chain 1.
    
 
 0.775
LOC101881614
Kinesin light chain 1-like.
    
 
 0.775
APBA2
Amyloid beta precursor protein binding family A member 2.
    
 
 0.705
LOC101880267
Nephrocystin 3.
    
 
 0.647
APP
Amyloid beta precursor protein.
   
 
 0.636
SMAP1
Small ArfGAP 1.
      
 0.516
ENSMUNP00000000874
annotation not available
   
 
 0.432
LOC101869798
Amyloid beta precursor like protein 2.
   
 
 0.432
APPBP2
Amyloid beta precursor protein binding protein 2.
    
 
 0.428
TTC19
Tetratricopeptide repeat domain 19.
    
 
 0.428
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
Server load: low (22%) [HD]