STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXB5Homeobox B5. (265 aa)    
Predicted Functional Partners:
HOXB6
Homeobox B6.
   
 
0.942
HOXB7
Homeobox B7.
   
 
0.925
HOXC4
Homeobox protein Hox-C4-like.
   
 
0.880
PBX4
PBX homeobox 4.
    
 0.857
LOC101868753
PBX homeobox 3.
    
 0.857
LOC101872953
PBX homeobox 1.
    
 0.857
HOXD4
Homeobox D4.
   
 
0.818
HOXA7
Homeobox A7.
   
  
0.798
HOXC6
Homeobox C6.
 
 
   0.785
HOXB3
Homeobox B3.
   
  
0.772
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.