STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MFSD1Major facilitator superfamily domain containing 1. (485 aa)    
Predicted Functional Partners:
CYB5R4
Cytochrome b5 reductase 4.
    
  0.793
GAPDH
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.619
PI4KB
Phosphatidylinositol 4-kinase beta.
 
  
 
 0.569
CSTF3
Cleavage stimulation factor subunit 3.
    
 0.566
MYD88
MYD88 innate immune signal transduction adaptor.
    
 0.562
TK1
Thymidine kinase 1.
    
 0.562
EPHX2
Epoxide hydrolase 2.
    
 0.559
TYMS
Thymidylate synthetase.
    
  0.549
MFSD8
Major facilitator superfamily domain containing 8.
   
  
 0.534
GFM1
G elongation factor mitochondrial 1.
     
 0.531
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.