STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC13A1Solute carrier family 13 member 1. (570 aa)    
Predicted Functional Partners:
MLYCD
malonyl-CoA decarboxylase.
    
 0.648
SLC1A1
Solute carrier family 1 member 1.
  
 
 0.551
SLC1A6
Solute carrier family 1 member 6.
  
 
 0.520
SLC1A3
Solute carrier family 1 member 3.
  
 
 0.520
SLC1A2
Solute carrier family 1 member 2.
    
 0.514
LOC101877092
Excitatory amino acid transporter 5-like.
    
 0.514
CCDC77
Coiled-coil domain containing 77.
    
 0.514
SLC1A4
Solute carrier family 1 member 4.
    
 0.514
SLC1A7
Solute carrier family 1 member 7.
    
 0.514
SLC20A2
Solute carrier family 20 member 2.
  
 
 0.436
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.