STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D7B889Uncharacterized protein. (113 aa)    
Predicted Functional Partners:
A0A0D7B9F4
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.817
A0A0D7B3Z4
RING-type domain-containing protein.
    
 0.814
A0A0D7B4D3
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.812
A0A0D7AZC9
SP-RING-type domain-containing protein.
    
 0.810
A0A0D7B2A0
ABC transporter.
    
 0.739
A0A0D7BL08
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.739
A0A0D7BT72
Structural maintenance of chromosomes protein.
    
 0.663
A0A0D7BHT4
SMC hinge domain-containing protein.
    
 0.631
A0A0D7BT55
Structural maintenance of chromosomes protein.
    
 0.631
A0A0D7B552
Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.546
Your Current Organism:
Cylindrobasidium torrendii
NCBI taxonomy Id: 1314674
Other names: C. torrendii FP15055 ss-10, Cylindrobasidium torrendii FP15055 ss-10
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