STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC6307_22655Unannotated protein; Belongs to the pseudouridine synthase RsuA family. (235 aa)    
Predicted Functional Partners:
cmk
Unannotated protein.
 
  
 0.751
BC6307_03050
Unannotated protein.
  
    0.748
BC6307_10325
Unannotated protein.
  
  
 0.630
der
Unannotated protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
 
  
 0.601
scpB
Unannotated protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
  
  
 0.565
BC6307_22650
Unannotated protein.
       0.510
pheT
Unannotated protein; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.456
Your Current Organism:
Bacillus cohnii
NCBI taxonomy Id: 1314751
Other names: B. cohnii NBRC 15565, Bacillus cohnii NBRC 15565
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.