STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC6307_04855Unannotated protein. (158 aa)    
Predicted Functional Partners:
BC6307_04860
Unannotated protein.
 
  
 0.971
BC6307_04875
Unannotated protein.
 
    0.900
BC6307_13975
Unannotated protein.
 
  
 0.878
BC6307_04865
Unannotated protein.
 
  
0.859
gpr
Unannotated protein; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
  
 0.828
BC6307_13960
Unannotated protein.
 
  
 0.817
BC6307_04850
Unannotated protein.
 
     0.814
BC6307_13660
Unannotated protein; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
   
 0.790
spoIIAB
Unannotated protein; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.
 
   
 0.789
BC6307_12990
Unannotated protein.
  
    0.783
Your Current Organism:
Bacillus cohnii
NCBI taxonomy Id: 1314751
Other names: B. cohnii NBRC 15565, Bacillus cohnii NBRC 15565
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.