A0A197KBW4 protein (Mortierella elongata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A197KBW4

Uncharacterized protein. (381 aa)

Predicted Functional Partners:

GET3

0.976

A0A197K947

0.733

A0A197KAJ1

0.733

A0A197K8Y2

0.618

A0A197K379

0.508

A0A197JZD1

0.454

A0A197KDG0

0.451

A0A197JSV9

0.448

A0A197KB94

0.443

A0A197K3T7

0.442

Your Current Organism:

Mortierella elongata

NCBI taxonomy Id: 1314771
Other names: M. elongata AG-77, Mortierella elongata AG-77

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A197JSV9	A0A197JZD1	A0A197JSV9	A0A197JZD1	SecY protein.	Got1-domain-containing protein.	0.418
A0A197JSV9	A0A197K8Y2	A0A197JSV9	A0A197K8Y2	SecY protein.	DUF410-domain-containing protein.	0.458
A0A197JSV9	A0A197K947	A0A197JSV9	A0A197K947	SecY protein.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.986
A0A197JSV9	A0A197KAJ1	A0A197JSV9	A0A197KAJ1	SecY protein.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.986
A0A197JSV9	A0A197KB94	A0A197JSV9	A0A197KB94	SecY protein.	DUF786-domain-containing protein.	0.583
A0A197JSV9	A0A197KBW4	A0A197JSV9	A0A197KBW4	SecY protein.	Uncharacterized protein.	0.448
A0A197JSV9	A0A197KDG0	A0A197JSV9	A0A197KDG0	SecY protein.	DUF788-domain-containing protein.	0.559
A0A197JSV9	GET3	A0A197JSV9	A0A197K460	SecY protein.	ATPase GET3; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. S [...]	0.670
A0A197JZD1	A0A197JSV9	A0A197JZD1	A0A197JSV9	Got1-domain-containing protein.	SecY protein.	0.418
A0A197JZD1	A0A197K3T7	A0A197JZD1	A0A197K3T7	Got1-domain-containing protein.	Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.	0.583
A0A197JZD1	A0A197KBW4	A0A197JZD1	A0A197KBW4	Got1-domain-containing protein.	Uncharacterized protein.	0.454
A0A197JZD1	GET3	A0A197JZD1	A0A197K460	Got1-domain-containing protein.	ATPase GET3; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. S [...]	0.782
A0A197K379	A0A197KBW4	A0A197K379	A0A197KBW4	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.508
A0A197K379	GET3	A0A197K379	A0A197K460	Zn(2)-C6 fungal-type domain-containing protein.	ATPase GET3; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. S [...]	0.436
A0A197K3T7	A0A197JZD1	A0A197K3T7	A0A197JZD1	Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.	Got1-domain-containing protein.	0.583
A0A197K3T7	A0A197K8Y2	A0A197K3T7	A0A197K8Y2	Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.	DUF410-domain-containing protein.	0.412
A0A197K3T7	A0A197KBW4	A0A197K3T7	A0A197KBW4	Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.	Uncharacterized protein.	0.442
A0A197K3T7	GET3	A0A197K3T7	A0A197K460	Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.	ATPase GET3; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. S [...]	0.476
A0A197K8Y2	A0A197JSV9	A0A197K8Y2	A0A197JSV9	DUF410-domain-containing protein.	SecY protein.	0.458
A0A197K8Y2	A0A197K3T7	A0A197K8Y2	A0A197K3T7	DUF410-domain-containing protein.	Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.	0.412