STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3N2PZD1RRM domain-containing protein. (167 aa)    
Predicted Functional Partners:
A0A3N2PQJ2
RNA-3'-phosphate cyclase family protein.
 
 
 
 0.868
A0A3N2PK60
Uncharacterized protein.
    
 0.844
A0A3N2PXF1
Uncharacterized protein.
    
 0.807
A0A3N2PK93
RNA-binding domain-containing protein.
  
0.802
A0A3N2PN35
Nuclear cap-binding protein subunit 2.
    
 0.791
A0A3N2PK01
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
0.764
A0A3N2PT55
Matrin-type domain-containing protein.
   
 0.764
A0A3N2PLI9
Uncharacterized protein.
    
 0.760
A0A3N2Q2G2
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.749
A0A3N2Q6B3
DNA-directed RNA polymerases I/II/III subunit 10.
    
  0.742
Your Current Organism:
Sodiomyces alkalinus
NCBI taxonomy Id: 1314773
Other names: Plectosphaerellaceae sp. AGG-2013 F11, S. alkalinus F11, Sodiomyces alkalinus F11
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